Halopseudomonas phragmitis strain S-6-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Halopseudomonas

Description

Halopseudomonas phragmitis strain S-6-2 is characterized by having a single replicon and is associated with accession number NZ_CP020100.1. This strain belongs to the genus Halopseudomonas, which is known for its ability to thrive in saline environments. Halopseudomonas species are typically aerobic, and they exhibit diverse metabolic capabilities, which may include the degradation of various organic compounds. While specific metabolic traits of strain S-6-2 are not detailed in the provided evidence, the ecological significance of such bacteria is noteworthy. They often play a role in biogeochemical cycles, particularly in environments where salt concentration is high, such as coastal regions and saline wetlands. The presence of Halopseudomonas phragmitis strain S-6-2 in these ecosystems suggests its potential involvement in nutrient cycling and organic matter decomposition. This can contribute to the health of the ecosystem by supporting plant growth and influencing microbial community dynamics. Overall, the existence of this strain highlights the adaptability of microorganisms to extreme conditions and their essential functions in maintaining ecological balance in saline habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusHalopseudomonas
SpeciesHalopseudomonas phragmitis
Strainstrain S-6-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopseudomonas phragmitis strain S-6-2 chromosome, complete

Gene Summary

Adenine Count

800396 bp

Thymine Count

810405 bp

Guanine Count

1210820 bp

Cytosine Count

1213532 bp

Genome Length

4035153 bp

Protein-coding Genes

3561 genes

Non-Coding Genes

201 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rnfh family proteinBVH74_RS02200Not AvailableNegative481544 - 48186711781.3
type ii toxin-antitoxin system rata family toxinBVH74_RS02205Not AvailableNegative481860 - 48229416296.7
sodium-dependent transporterBVH74_RS02210Not AvailableNegative482302 - 48370550486.1
ssra-binding protein smpbBVH74_RS02215Not AvailablePositive483829 - 48431118321.3
Tmrna,resume consensus sequence (at 88): tatagttgccaacgacgaNot AvailableNot AvailablePositive484542 - 484897Not Available
nyn domain-containing proteinBVH74_RS02225Not AvailableNegative484994 - 48568025394.7
nuclease-related domain-containing proteinBVH74_RS02230Not AvailableNegative486105 - 48687829381.9
restriction endonucleaseBVH74_RS02235Not AvailableNegative486903 - 48781433510.1
type i restriction endonuclease subunit rBVH74_RS02240Not AvailableNegative487842 - 491027119560.0
restriction endonuclease subunit sBVH74_RS02245Not AvailableNegative491027 - 49235249490.8

Displaying genes 621 – 630 of 3762 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.