Halopseudomonas phragmitis strain S-6-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Halopseudomonas

Description

Halopseudomonas phragmitis strain S-6-2 is characterized by having a single replicon and is associated with accession number NZ_CP020100.1. This strain belongs to the genus Halopseudomonas, which is known for its ability to thrive in saline environments. Halopseudomonas species are typically aerobic, and they exhibit diverse metabolic capabilities, which may include the degradation of various organic compounds. While specific metabolic traits of strain S-6-2 are not detailed in the provided evidence, the ecological significance of such bacteria is noteworthy. They often play a role in biogeochemical cycles, particularly in environments where salt concentration is high, such as coastal regions and saline wetlands. The presence of Halopseudomonas phragmitis strain S-6-2 in these ecosystems suggests its potential involvement in nutrient cycling and organic matter decomposition. This can contribute to the health of the ecosystem by supporting plant growth and influencing microbial community dynamics. Overall, the existence of this strain highlights the adaptability of microorganisms to extreme conditions and their essential functions in maintaining ecological balance in saline habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusHalopseudomonas
SpeciesHalopseudomonas phragmitis
Strainstrain S-6-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopseudomonas phragmitis strain S-6-2 chromosome, complete

Gene Summary

Adenine Count

800396 bp

Thymine Count

810405 bp

Guanine Count

1210820 bp

Cytosine Count

1213532 bp

Genome Length

4035153 bp

Protein-coding Genes

3561 genes

Non-Coding Genes

201 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4123 domain-containing proteinBVH74_RS01300Not AvailableNegative288912 - 28964927861.9
type vi secretion system tip protein vgrgBVH74_RS01305Not AvailableNegative289646 - 29172477197.7
hcp family type vi secretion system effectorBVH74_RS01310Not AvailableNegative291857 - 29237519530.9
lps export abc transporter permease lptgBVH74_RS01315Not AvailableNegative292825 - 29388938994.9
lps export abc transporter permease lptfBVH74_RS01320Not AvailableNegative293876 - 29498240456.9
leucyl aminopeptidaseBVH74_RS01325Not AvailablePositive295139 - 29662952051.2
dna polymerase iii subunit chiBVH74_RS01330Not AvailablePositive296643 - 29707416335.1
hypothetical proteinBVH74_RS01335Not AvailablePositive297079 - 29760619451.9
valine--trna ligaseBVH74_RS01340Not AvailablePositive297736 - 300585106904.0
slc13 family permeaseBVH74_RS01345Not AvailablePositive300601 - 30243065402.9

Displaying genes 441 – 450 of 3762 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.