Halopseudomonas phragmitis strain S-6-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Halopseudomonas

Description

Halopseudomonas phragmitis strain S-6-2 is characterized by having a single replicon and is associated with accession number NZ_CP020100.1. This strain belongs to the genus Halopseudomonas, which is known for its ability to thrive in saline environments. Halopseudomonas species are typically aerobic, and they exhibit diverse metabolic capabilities, which may include the degradation of various organic compounds. While specific metabolic traits of strain S-6-2 are not detailed in the provided evidence, the ecological significance of such bacteria is noteworthy. They often play a role in biogeochemical cycles, particularly in environments where salt concentration is high, such as coastal regions and saline wetlands. The presence of Halopseudomonas phragmitis strain S-6-2 in these ecosystems suggests its potential involvement in nutrient cycling and organic matter decomposition. This can contribute to the health of the ecosystem by supporting plant growth and influencing microbial community dynamics. Overall, the existence of this strain highlights the adaptability of microorganisms to extreme conditions and their essential functions in maintaining ecological balance in saline habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusHalopseudomonas
SpeciesHalopseudomonas phragmitis
Strainstrain S-6-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopseudomonas phragmitis strain S-6-2 chromosome, complete

Gene Summary

Adenine Count

800396 bp

Thymine Count

810405 bp

Guanine Count

1210820 bp

Cytosine Count

1213532 bp

Genome Length

4035153 bp

Protein-coding Genes

3561 genes

Non-Coding Genes

201 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system major pseudopilin gspgBVH74_RS10150Not AvailablePositive2199903 - 220037017278.4
prepilin-type n-terminal cleavage/methylation domain-containing proteinBVH74_RS10155Not AvailablePositive2200370 - 220090919970.5
type ii secretion system minor pseudopilin gspiBVH74_RS10160Not AvailablePositive2200893 - 220128214278.2
type ii secretion system minor pseudopilin gspjBVH74_RS10165Not AvailablePositive2201279 - 220190823116.2
type ii secretion system protein gspkBVH74_RS10170Not AvailablePositive2201905 - 220270229054.8
type ii secretion system protein gsplBVH74_RS10175Not AvailablePositive2202721 - 220395345564.1
type ii secretion system protein gspmBVH74_RS10180Not AvailablePositive2203950 - 220443517943.7
type ii secretion system protein nBVH74_RS10185Not AvailablePositive2204435 - 220519327886.1
outer membrane protein assembly factor bamdBVH74_RS10190Not AvailablePositive2205209 - 220582622614.0
recombination-associated protein rdgcBVH74_RS10195Not AvailableNegative2206088 - 220700534043.7

Displaying genes 2211 – 2220 of 3762 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.