Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | RPYSC3_RS04860 | Not Available | Negative | 1043431 - 1043640 | 7778.69 |
| duf2975 domain-containing protein | RPYSC3_RS04865 | Not Available | Negative | 1043644 - 1044219 | 19887.9 |
| hypothetical protein | RPYSC3_RS04870 | Not Available | Positive | 1044298 - 1044876 | 20736.4 |
| ubix family flavin prenyltransferase | RPYSC3_RS04875 | Not Available | Negative | 1044944 - 1045546 | 21463.2 |
| ubid family decarboxylase | RPYSC3_RS04880 | Not Available | Negative | 1045543 - 1047081 | 56579.8 |
| scp2 domain-containing protein | RPYSC3_RS04885 | Not Available | Positive | 1047197 - 1047742 | 19643.1 |
| peptidase u32 family protein | RPYSC3_RS04890 | Not Available | Positive | 1047746 - 1048723 | 35196.7 |
| u32 family peptidase | RPYSC3_RS04895 | Not Available | Positive | 1048793 - 1049713 | 33301.5 |
| inositol monophosphatase family protein | RPYSC3_RS04900 | Not Available | Negative | 1050096 - 1050884 | 28504.2 |
| tetratricopeptide repeat protein | RPYSC3_RS04905 | Not Available | Negative | 1050988 - 1052082 | 38438.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
