Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | RPYSC3_RS04660 | Not Available | Negative | 1006623 - 1007399 | 26627.1 |
| sdr family nad(p)-dependent oxidoreductase | RPYSC3_RS04665 | Not Available | Positive | 1007539 - 1008273 | 25515.8 |
| duf459 domain-containing protein | RPYSC3_RS04670 | Not Available | Negative | 1008387 - 1010087 | 60363.0 |
| 4-hydroxy-tetrahydrodipicolinate synthase | RPYSC3_RS04675 | Not Available | Negative | 1010234 - 1011151 | 32808.9 |
| hypothetical protein | RPYSC3_RS25105 | Not Available | Positive | 1011589 - 1011753 | 5324.31 |
| lytic murein transglycosylase | RPYSC3_RS04685 | Not Available | Negative | 1011792 - 1013177 | 50418.4 |
| lyse family translocator | RPYSC3_RS04690 | Not Available | Positive | 1013372 - 1014004 | 21778.1 |
| sulfite exporter taue/safe family protein | RPYSC3_RS04695 | Not Available | Negative | 1014019 - 1014786 | 26632.7 |
| voc family protein | RPYSC3_RS04700 | Not Available | Negative | 1014819 - 1015250 | 15652.3 |
| tetr/acrr family transcriptional regulator | RPYSC3_RS04705 | Not Available | Positive | 1015313 - 1015897 | 20081.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
