Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | RPYSC3_RS04610 | Not Available | Negative | 991214 - 992212 | 35291.6 |
| hypothetical protein | RPYSC3_RS04615 | Not Available | Negative | 992343 - 992615 | 10359.4 |
| diguanylate cyclase | RPYSC3_RS04620 | Not Available | Positive | 992783 - 994291 | 55726.2 |
| utp--glucose-1-phosphate uridylyltransferase galu | RPYSC3_RS04625 | Not Available | Negative | 994319 - 995194 | 32199.1 |
| alpha/beta hydrolase | RPYSC3_RS04630 | Not Available | Negative | 995318 - 996262 | 34853.9 |
| hsp20 family protein | RPYSC3_RS04635 | Not Available | Positive | 996484 - 996960 | 17180.3 |
| hypothetical protein | RPYSC3_RS04640 | Not Available | Negative | 997102 - 997884 | 27117.3 |
| glutamate synthase large subunit | RPYSC3_RS04645 | Not Available | Positive | 998345 - 1003072 | 171695.0 |
| glutamate synthase subunit beta | RPYSC3_RS04650 | Not Available | Positive | 1003229 - 1004683 | 51890.0 |
| endonuclease domain-containing protein | RPYSC3_RS04655 | Not Available | Positive | 1005140 - 1005544 | 15155.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
