Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing hybrid sensor histidine kinase/response regulator | RPYSC3_RS04455 | Not Available | Negative | 956995 - 960504 | 126753.0 |
| 5-aminolevulinate synthase | RPYSC3_RS04460 | Not Available | Negative | 960693 - 961922 | 44643.5 |
| mbl fold metallo-hydrolase | RPYSC3_RS04465 | Not Available | Negative | 962143 - 963207 | 39481.2 |
| methyl-accepting chemotaxis protein | RPYSC3_RS04470 | Not Available | Negative | 963374 - 965512 | 75158.2 |
| outer membrane protein | RPYSC3_RS04475 | Not Available | Negative | 965726 - 966430 | 24590.6 |
| hypothetical protein | RPYSC3_RS25230 | Not Available | Positive | 966795 - 966995 | 6843.38 |
| metal abc transporter atp-binding protein | RPYSC3_RS04485 | Not Available | Positive | 966998 - 967747 | 26534.7 |
| metal abc transporter permease | RPYSC3_RS04490 | Not Available | Positive | 967755 - 968624 | 30238.5 |
| metal abc transporter substrate-binding protein | RPYSC3_RS04495 | Not Available | Positive | 968630 - 969547 | 32178.1 |
| cobw family gtp-binding protein | RPYSC3_RS04500 | Not Available | Positive | 969694 - 970743 | 38858.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
