Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit b | RPYSC3_RS04405 | Not Available | Negative | 948637 - 949194 | 19131.6 |
| f0f1 atp synthase subunit c | RPYSC3_RS04410 | Not Available | Negative | 949252 - 949479 | 7445.35 |
| f0f1 atp synthase subunit a | RPYSC3_RS04415 | Not Available | Negative | 949528 - 950274 | 26953.1 |
| atpz/atpi family protein | RPYSC3_RS04420 | Not Available | Negative | 950344 - 950730 | 13457.0 |
| 2-hydroxychromene-2-carboxylate isomerase | RPYSC3_RS04425 | Not Available | Positive | 951033 - 951656 | 23515.1 |
| hypothetical protein | RPYSC3_RS04430 | Not Available | Positive | 951704 - 952297 | 21209.2 |
| secondary thiamine-phosphate synthase enzyme yjbq | RPYSC3_RS04435 | Not Available | Positive | 952321 - 952794 | 16817.1 |
| mfs transporter | RPYSC3_RS04440 | Not Available | Negative | 952987 - 954651 | 59700.6 |
| response regulator transcription factor | RPYSC3_RS04445 | Not Available | Positive | 954988 - 955665 | 24191.3 |
| integrase core domain-containing protein | RPYSC3_RS04450 | Not Available | Negative | 955840 - 956820 | 38346.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
