Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptide peptidase sppa | RPYSC3_RS00350 | Not Available | Positive | 73550 - 74530 | 34683.1 |
| integration host factor subunit beta | RPYSC3_RS00355 | Not Available | Positive | 74696 - 75010 | 11704.8 |
| lipopolysaccharide assembly protein lapa domain-containing protein | RPYSC3_RS00360 | Not Available | Positive | 75048 - 75434 | 13957.2 |
| phosphoribosylanthranilate isomerase | RPYSC3_RS00365 | Not Available | Positive | 75493 - 76134 | 22736.2 |
| tryptophan synthase subunit beta | RPYSC3_RS00370 | Not Available | Positive | 76148 - 77362 | 43554.5 |
| tryptophan synthase subunit alpha | RPYSC3_RS00375 | Not Available | Positive | 77362 - 78198 | 28669.7 |
| acetyl-coa carboxylase, carboxyltransferase subunit beta | RPYSC3_RS00380 | Not Available | Positive | 78308 - 79291 | 35856.5 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | RPYSC3_RS00385 | Not Available | Positive | 79288 - 80616 | 47362.5 |
| atp-dependent dna ligase | RPYSC3_RS00390 | Not Available | Negative | 80626 - 81684 | 38497.3 |
| thioredoxin | RPYSC3_RS00395 | Not Available | Negative | 81870 - 82190 | 11253.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
