Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPYSC3_RS04355 | Not Available | Positive | 940755 - 940922 | 5972.62 |
| cytochrome c oxidase assembly protein | RPYSC3_RS04360 | Not Available | Positive | 940937 - 941563 | 22527.7 |
| cytochrome c oxidase subunit 3 | RPYSC3_RS04365 | Not Available | Positive | 941636 - 942493 | 32129.9 |
| duf983 domain-containing protein | RPYSC3_RS04370 | Not Available | Positive | 942592 - 942978 | 13829.2 |
| surf1 family protein | RPYSC3_RS04375 | Not Available | Positive | 942975 - 943778 | 29180.4 |
| threonine synthase | RPYSC3_RS04380 | Not Available | Positive | 943926 - 945344 | 51092.4 |
| m16 family metallopeptidase | RPYSC3_RS04385 | Not Available | Positive | 945341 - 946630 | 46339.1 |
| gnat family n-acetyltransferase | RPYSC3_RS04390 | Not Available | Positive | 946692 - 947279 | 22172.8 |
| hypothetical protein | RPYSC3_RS04395 | Not Available | Positive | 947377 - 948030 | 22849.2 |
| atp f0f1 synthase subunit b | RPYSC3_RS04400 | Not Available | Negative | 948140 - 948631 | 17649.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
