Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nyn domain-containing protein | RPYSC3_RS04305 | Not Available | Positive | 931275 - 931937 | 24835.2 |
| signal peptidase i | RPYSC3_RS04310 | Not Available | Negative | 932084 - 932854 | 27391.5 |
| metalloprotease tldd | RPYSC3_RS04315 | Not Available | Negative | 932851 - 934278 | 50603.9 |
| duf433 domain-containing protein | RPYSC3_RS04320 | Not Available | Positive | 934402 - 934617 | 8107.73 |
| marr family winged helix-turn-helix transcriptional regulator | RPYSC3_RS04325 | Not Available | Positive | 934925 - 935395 | 17960.8 |
| organic hydroperoxide resistance protein | RPYSC3_RS04330 | Not Available | Positive | 935517 - 935942 | 14428.4 |
| invasion associated locus b family protein | RPYSC3_RS04335 | Not Available | Negative | 936224 - 936772 | 18854.1 |
| cytochrome c oxidase subunit ii | RPYSC3_RS04340 | Not Available | Positive | 937183 - 938040 | 31712.8 |
| cytochrome c oxidase subunit i | RPYSC3_RS04345 | Not Available | Positive | 938107 - 939732 | 59631.5 |
| heme o synthase | RPYSC3_RS04350 | Not Available | Positive | 939805 - 940743 | 33769.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
