Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent dna methyltransferase | RPYSC3_RS04205 | Not Available | Positive | 903358 - 904332 | 35019.0 |
| outer membrane protein | RPYSC3_RS04210 | Not Available | Negative | 904513 - 905865 | 47462.8 |
| abc transporter substrate-binding protein | RPYSC3_RS04215 | Not Available | Positive | 906264 - 907430 | 42320.3 |
| ligase-associated dna damage response dexh box helicase | RPYSC3_RS04220 | Not Available | Positive | 907625 - 910318 | 98690.8 |
| ligase-associated dna damage response endonuclease pdem | RPYSC3_RS04225 | Not Available | Positive | 910434 - 911108 | 23862.6 |
| lysr family transcriptional regulator | RPYSC3_RS04230 | Not Available | Negative | 911243 - 912106 | 31488.9 |
| dmt family transporter | RPYSC3_RS04235 | Not Available | Positive | 912204 - 913124 | 31949.9 |
| nramp family divalent metal transporter | RPYSC3_RS04240 | Not Available | Positive | 913245 - 914552 | 46107.8 |
| tigr02186 family protein | RPYSC3_RS04245 | Not Available | Negative | 914721 - 915488 | 28297.5 |
| sulfite exporter taue/safe family protein | RPYSC3_RS04250 | Not Available | Negative | 915515 - 916438 | 32366.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
