Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase | RPYSC3_RS04155 | Not Available | Negative | 893380 - 894138 | 27009.2 |
| helix-turn-helix transcriptional regulator | RPYSC3_RS04160 | Not Available | Negative | 894225 - 894851 | 22583.8 |
| duf952 domain-containing protein | RPYSC3_RS04165 | Not Available | Positive | 895188 - 895532 | 12122.3 |
| quinone-dependent dihydroorotate dehydrogenase | RPYSC3_RS04170 | Not Available | Positive | 895529 - 896623 | 39138.3 |
| mbl fold metallo-hydrolase | RPYSC3_RS04175 | Not Available | Negative | 896953 - 897687 | 26896.7 |
| carbonic anhydrase | RPYSC3_RS04180 | Not Available | Negative | 897831 - 898538 | 24475.6 |
| mate family efflux transporter | RPYSC3_RS04185 | Not Available | Negative | 898676 - 899938 | 44858.0 |
| duf6460 domain-containing protein | RPYSC3_RS04190 | Not Available | Negative | 900017 - 900319 | 11400.3 |
| atp-dependent dna ligase | RPYSC3_RS04195 | Not Available | Negative | 900391 - 902256 | 69022.8 |
| ligase-associated dna damage response exonuclease | RPYSC3_RS04200 | Not Available | Negative | 902253 - 903299 | 37202.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
