Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | RPYSC3_RS04005 | Not Available | Positive | 855361 - 856959 | 58808.3 |
| class i sam-dependent methyltransferase | RPYSC3_RS04010 | Not Available | Positive | 857290 - 857907 | 22181.8 |
| ef-hand domain-containing protein | RPYSC3_RS04015 | Not Available | Negative | 857962 - 858396 | 15911.4 |
| tonb-dependent receptor family protein | RPYSC3_RS04020 | Not Available | Negative | 858417 - 860780 | 84484.1 |
| crp/fnr family transcriptional regulator | RPYSC3_RS04025 | Not Available | Positive | 861177 - 861881 | 25316.7 |
| sensor domain-containing diguanylate cyclase | RPYSC3_RS04030 | Not Available | Positive | 861987 - 862928 | 34778.6 |
| duf6361 family protein | RPYSC3_RS04035 | Not Available | Positive | 863328 - 864557 | 45576.0 |
| phospholipase d family protein | RPYSC3_RS04040 | Not Available | Positive | 864554 - 866371 | 65993.5 |
| dead/deah box helicase family protein | RPYSC3_RS04045 | Not Available | Positive | 866371 - 869427 | 114072.0 |
| Trna-arg | Not Available | Not Available | Positive | 869436 - 869512 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
