Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate abc transporter permease ugpe | RPYSC3_RS00300 | Not Available | Negative | 63027 - 63875 | 31544.5 |
| sn-glycerol-3-phosphate abc transporter permease ugpa | RPYSC3_RS00305 | Not Available | Negative | 63875 - 64756 | 32760.8 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | RPYSC3_RS00310 | Not Available | Negative | 64879 - 66207 | 48244.5 |
| caib/baif coa transferase family protein | RPYSC3_RS00315 | Not Available | Negative | 66437 - 67642 | 43261.7 |
| Trna-ala | Not Available | Not Available | Positive | 67820 - 67895 | Not Available |
| tigr02300 family protein | RPYSC3_RS00325 | Not Available | Negative | 67966 - 68370 | 14461.2 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | RPYSC3_RS00330 | Not Available | Positive | 68513 - 69850 | 46373.1 |
| lysophospholipid acyltransferase family protein | RPYSC3_RS00335 | Not Available | Negative | 69854 - 70528 | 24390.2 |
| (d)cmp kinase | RPYSC3_RS00340 | Not Available | Positive | 70684 - 71322 | 22413.8 |
| 30s ribosomal protein s1 | RPYSC3_RS00345 | Not Available | Positive | 71623 - 73320 | 62804.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
