Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase beta subunit | RPYSC3_RS03855 | Not Available | Positive | 815476 - 817032 | 54917.0 |
| formate dehydrogenase subunit alpha | RPYSC3_RS03860 | Not Available | Positive | 817046 - 819892 | 103711.0 |
| formate dehydrogenase accessory sulfurtransferase fdhd | RPYSC3_RS03865 | Not Available | Positive | 819892 - 820722 | 29058.9 |
| formate dehydrogenase subunit delta | RPYSC3_RS03870 | Not Available | Positive | 820712 - 820927 | 7746.42 |
| ofa family mfs transporter | RPYSC3_RS03875 | Not Available | Positive | 820991 - 822640 | 58863.2 |
| pqq-dependent sugar dehydrogenase | RPYSC3_RS03880 | Not Available | Positive | 822904 - 824157 | 45279.8 |
| c-type cytochrome | RPYSC3_RS03885 | Not Available | Positive | 824391 - 824981 | 21236.4 |
| catalase | RPYSC3_RS03890 | Not Available | Positive | 825378 - 827474 | 77423.8 |
| acyl-coa dehydrogenase family protein | RPYSC3_RS03895 | Not Available | Positive | 827726 - 828703 | 34195.1 |
| aaa family atpase | RPYSC3_RS03900 | Not Available | Positive | 828706 - 829653 | 34733.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
