Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| feccd family abc transporter permease | RPYSC3_RS03805 | Not Available | Negative | 805235 - 806260 | 34435.5 |
| hoxn/hupn/nixa family nickel/cobalt transporter | RPYSC3_RS03810 | Not Available | Negative | 806268 - 807326 | 37964.5 |
| dmt family transporter | RPYSC3_RS03815 | Not Available | Negative | 807666 - 807989 | 11017.9 |
| class i sam-dependent methyltransferase | RPYSC3_RS03820 | Not Available | Negative | 807986 - 808723 | 27476.1 |
| duf3419 family protein | RPYSC3_RS03825 | Not Available | Positive | 808876 - 810099 | 46010.9 |
| tade/tadg family type iv pilus assembly protein | RPYSC3_RS03830 | Not Available | Positive | 810651 - 812057 | 49189.6 |
| tade/tadg family type iv pilus assembly protein | RPYSC3_RS03835 | Not Available | Positive | 812068 - 812646 | 20660.0 |
| tade/tadg family type iv pilus assembly protein | RPYSC3_RS03840 | Not Available | Positive | 812659 - 813348 | 23945.0 |
| lysr family transcriptional regulator | RPYSC3_RS03845 | Not Available | Positive | 813860 - 814753 | 32584.9 |
| formate dehydrogenase subunit gamma | RPYSC3_RS03850 | Not Available | Positive | 815009 - 815479 | 16639.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
