Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1636 domain-containing protein | RPYSC3_RS03755 | Not Available | Positive | 793551 - 793982 | 14605.4 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | RPYSC3_RS03760 | Not Available | Positive | 793979 - 794509 | 18696.6 |
| cobalamin biosynthesis protein cobw | RPYSC3_RS03765 | Not Available | Positive | 794513 - 795517 | 35017.8 |
| cobaltochelatase subunit cobn | RPYSC3_RS03770 | Not Available | Positive | 795649 - 799386 | 134890.0 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | RPYSC3_RS03775 | Not Available | Positive | 799383 - 800009 | 23308.3 |
| cobyric acid synthase | RPYSC3_RS03780 | Not Available | Positive | 800152 - 801636 | 51746.6 |
| adenosylcobinamide-phosphate synthase cbib | RPYSC3_RS03785 | Not Available | Negative | 801609 - 802580 | 34284.3 |
| abc transporter substrate-binding protein | RPYSC3_RS03790 | Not Available | Negative | 802582 - 803394 | 29283.4 |
| threonine-phosphate decarboxylase cobd | RPYSC3_RS03795 | Not Available | Positive | 803458 - 804447 | 35448.2 |
| abc transporter atp-binding protein | RPYSC3_RS03800 | Not Available | Negative | 804459 - 805238 | 27538.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
