Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate c-p lyase system protein phnh | RPYSC3_RS03660 | Not Available | Negative | 778377 - 778979 | 21015.1 |
| phosphonate c-p lyase system protein phng | RPYSC3_RS03665 | Not Available | Negative | 778982 - 779455 | 16353.6 |
| phosphonate metabolism transcriptional regulator phnf | RPYSC3_RS03670 | Not Available | Positive | 779567 - 780295 | 25977.1 |
| hypothetical protein | RPYSC3_RS24920 | Not Available | Negative | 780317 - 780472 | 5220.45 |
| phosphonate abc transporter, permease protein phne | RPYSC3_RS03675 | Not Available | Negative | 780618 - 781484 | 31129.7 |
| phosphonate abc transporter, permease protein phne | RPYSC3_RS03680 | Not Available | Negative | 781481 - 782362 | 32072.7 |
| phosphonate abc transporter substrate-binding protein | RPYSC3_RS03685 | Not Available | Negative | 782431 - 783339 | 33306.0 |
| phosphonate abc transporter atp-binding protein | RPYSC3_RS03690 | Not Available | Negative | 783448 - 784260 | 29202.4 |
| chloramphenicol acetyltransferase | RPYSC3_RS03695 | Not Available | Positive | 784440 - 785117 | 24801.2 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | RPYSC3_RS03700 | Not Available | Positive | 785114 - 786307 | 43058.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
