Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | RPYSC3_RS03610 | Not Available | Positive | 769037 - 769912 | 31380.1 |
| bug family tripartite tricarboxylate transporter substrate binding protein | RPYSC3_RS03615 | Not Available | Positive | 770072 - 771046 | 34376.3 |
| abc transporter substrate-binding protein | RPYSC3_RS03620 | Not Available | Positive | 771103 - 772323 | 44068.4 |
| pyridoxamine 5'-phosphate oxidase family protein | RPYSC3_RS03625 | Not Available | Negative | 772496 - 773143 | 23747.4 |
| phosphonate metabolism protein/1,5-bisphosphokinase (prpp-forming) phnn | RPYSC3_RS03630 | Not Available | Negative | 773124 - 773708 | 20477.3 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | RPYSC3_RS03635 | Not Available | Negative | 773705 - 774859 | 41885.1 |
| phosphonate c-p lyase system protein phnl | RPYSC3_RS03640 | Not Available | Negative | 774880 - 775590 | 25108.5 |
| phosphonate c-p lyase system protein phnk | RPYSC3_RS03645 | Not Available | Negative | 775590 - 776408 | 29721.1 |
| alpha-d-ribose 1-methylphosphonate 5-phosphate c-p-lyase phnj | RPYSC3_RS03650 | Not Available | Negative | 776401 - 777279 | 32445.5 |
| carbon-phosphorus lyase complex subunit phni | RPYSC3_RS03655 | Not Available | Negative | 777276 - 778373 | 40059.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
