Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | RPYSC3_RS03560 | Not Available | Positive | 753372 - 754193 | 29221.7 |
| 2,3-epoxybenzoyl-coa dihydrolase | RPYSC3_RS03565 | Not Available | Positive | 754322 - 756016 | 61889.7 |
| benzoyl-coa 2,3-epoxidase subunit boxb | RPYSC3_RS03570 | Not Available | Positive | 756193 - 757644 | 55131.4 |
| nadph-dependent glutamate synthase | RPYSC3_RS03575 | Not Available | Positive | 757969 - 760953 | 109211.0 |
| ygiq family radical sam protein | RPYSC3_RS03580 | Not Available | Negative | 760975 - 763008 | 75606.8 |
| tetr/acrr family transcriptional regulator | RPYSC3_RS03585 | Not Available | Negative | 763075 - 763689 | 22040.6 |
| hlyd family secretion protein | RPYSC3_RS03590 | Not Available | Positive | 763836 - 764867 | 37372.4 |
| ribosome-associated atpase/putative transporter rbba | RPYSC3_RS03595 | Not Available | Positive | 764864 - 767578 | 99145.5 |
| abc transporter permease | RPYSC3_RS03600 | Not Available | Positive | 767581 - 768708 | 40811.8 |
| hypothetical protein | RPYSC3_RS03605 | Not Available | Negative | 768716 - 768895 | 6755.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
