Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | RPYSC3_RS03510 | Not Available | Negative | 740884 - 741606 | 26298.2 |
| abc transporter permease subunit | RPYSC3_RS03515 | Not Available | Negative | 741603 - 743390 | 63402.7 |
| branched-chain amino acid abc transporter permease | RPYSC3_RS03520 | Not Available | Negative | 743393 - 744253 | 30632.8 |
| abc transporter substrate-binding protein | RPYSC3_RS03525 | Not Available | Negative | 744339 - 745517 | 40719.1 |
| benzoate-coa ligase family protein | RPYSC3_RS03530 | Not Available | Negative | 745695 - 747314 | 58918.1 |
| 4-hydroxybenzoyl-coa reductase subunit gamma | RPYSC3_RS03535 | Not Available | Positive | 747481 - 747972 | 17603.3 |
| 4-hydroxybenzoyl-coa reductase subunit alpha | RPYSC3_RS03540 | Not Available | Positive | 747969 - 750302 | 82550.2 |
| 4-hydroxybenzoyl-coa reductase subunit beta | RPYSC3_RS03545 | Not Available | Positive | 750299 - 751282 | 34463.9 |
| crp/fnr family transcriptional regulator | RPYSC3_RS03550 | Not Available | Negative | 751306 - 752031 | 25812.6 |
| zn-dependent alcohol dehydrogenase | RPYSC3_RS03555 | Not Available | Positive | 752223 - 753335 | 39295.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
