Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease d | RPYSC3_RS00250 | Not Available | Positive | 54091 - 54705 | 22660.0 |
| lps export abc transporter periplasmic protein lptc | RPYSC3_RS00255 | Not Available | Positive | 54935 - 55675 | 26751.1 |
| lpta/osta family protein | RPYSC3_RS00260 | Not Available | Positive | 55684 - 56349 | 23034.5 |
| lps export abc transporter atp-binding protein | RPYSC3_RS00265 | Not Available | Positive | 56517 - 57479 | 34946.0 |
| rna polymerase factor sigma-54 | RPYSC3_RS00270 | Not Available | Positive | 57685 - 59331 | 59610.8 |
| ribosome hibernation-promoting factor, hpf/yfia family | RPYSC3_RS00275 | Not Available | Positive | 59389 - 59994 | 21974.8 |
| pts iia-like nitrogen regulatory protein ptsn | RPYSC3_RS00280 | Not Available | Positive | 60269 - 60730 | 16510.4 |
| duf1150 family protein | RPYSC3_RS00285 | Not Available | Negative | 61034 - 61300 | 9287.03 |
| hsp20 family protein | RPYSC3_RS00290 | Not Available | Negative | 61351 - 61776 | 15985.2 |
| sn-glycerol-3-phosphate import atp-binding protein ugpc | RPYSC3_RS00295 | Not Available | Negative | 61930 - 63021 | 38627.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
