Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| giy-yig nuclease family protein | RPYSC3_RS03310 | Not Available | Positive | 702055 - 702324 | 10215.0 |
| pyrimidine 5'-nucleotidase | RPYSC3_RS03315 | Not Available | Negative | 702425 - 703126 | 26484.5 |
| duf1036 domain-containing protein | RPYSC3_RS03320 | Not Available | Negative | 703123 - 704121 | 35106.8 |
| acetylglutamate kinase | RPYSC3_RS03325 | Not Available | Negative | 704229 - 705125 | 31529.6 |
| duf423 domain-containing protein | RPYSC3_RS03330 | Not Available | Negative | 705250 - 705618 | 12297.5 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | RPYSC3_RS03335 | Not Available | Negative | 705618 - 706268 | 23375.3 |
| membrane protein insertase yidc | RPYSC3_RS03340 | Not Available | Negative | 706351 - 708216 | 68615.9 |
| ribonuclease p protein component | RPYSC3_RS03345 | Not Available | Negative | 708233 - 708574 | 12879.9 |
| 50s ribosomal protein l34 | RPYSC3_RS03350 | Not Available | Negative | 708598 - 708732 | 5120.46 |
| sensor histidine kinase | RPYSC3_RS03355 | Not Available | Positive | 709062 - 710540 | 53601.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
