Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaredoxin 3 | RPYSC3_RS03160 | Not Available | Positive | 674218 - 674493 | 9697.58 |
| carbon-nitrogen hydrolase family protein | RPYSC3_RS03165 | Not Available | Positive | 674490 - 675365 | 31789.1 |
| duf1178 family protein | RPYSC3_RS03170 | Not Available | Positive | 675362 - 675856 | 18104.5 |
| eama family transporter | RPYSC3_RS03175 | Not Available | Positive | 676080 - 676517 | 15119.0 |
| eama family transporter | RPYSC3_RS03180 | Not Available | Negative | 676518 - 677417 | 31949.1 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | RPYSC3_RS03185 | Not Available | Negative | 677545 - 678306 | 28196.3 |
| aspartate kinase | RPYSC3_RS03190 | Not Available | Positive | 678498 - 679751 | 44616.1 |
| phosphoenolpyruvate--protein phosphotransferase | RPYSC3_RS03195 | Not Available | Positive | 680082 - 682349 | 82374.5 |
| peptide chain release factor 1 | RPYSC3_RS03200 | Not Available | Positive | 682405 - 683490 | 40071.7 |
| peptide chain release factor n(5)-glutamine methyltransferase | RPYSC3_RS03205 | Not Available | Positive | 683487 - 684356 | 30906.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
