Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPYSC3_RS03060 | Not Available | Positive | 649583 - 649834 | 9294.09 |
| hypothetical protein | RPYSC3_RS03065 | Not Available | Negative | 649930 - 650142 | 8061.55 |
| abc transporter substrate-binding protein | RPYSC3_RS03070 | Not Available | Negative | 650433 - 651653 | 44212.8 |
| duf1304 domain-containing protein | RPYSC3_RS03075 | Not Available | Negative | 651805 - 652167 | 12651.9 |
| duf1330 domain-containing protein | RPYSC3_RS03080 | Not Available | Positive | 652249 - 652677 | 16029.3 |
| atp-binding protein | RPYSC3_RS03085 | Not Available | Positive | 652773 - 655517 | 97825.0 |
| tex family protein | RPYSC3_RS03090 | Not Available | Positive | 655707 - 658043 | 84636.7 |
| chromate efflux transporter | RPYSC3_RS03095 | Not Available | Negative | 658066 - 659286 | 41639.6 |
| sdr family oxidoreductase | RPYSC3_RS03100 | Not Available | Negative | 659283 - 660176 | 31899.3 |
| amino acid permease | RPYSC3_RS03105 | Not Available | Negative | 660213 - 661694 | 51258.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
