Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | RPYSC3_RS03010 | Not Available | Negative | 638215 - 638880 | 23382.7 |
| vwa domain-containing protein | RPYSC3_RS03015 | Not Available | Negative | 638971 - 640089 | 40371.2 |
| mmcb family dna repair protein | RPYSC3_RS03020 | Not Available | Positive | 640245 - 640724 | 17701.3 |
| actr/prra/rega family redox response regulator transcription factor | RPYSC3_RS03025 | Not Available | Negative | 640863 - 641417 | 20153.2 |
| acts/prrb/regb family redox-sensitive histidine kinase | RPYSC3_RS03030 | Not Available | Negative | 641509 - 642831 | 48372.0 |
| abc transporter atp-binding protein | RPYSC3_RS03035 | Not Available | Positive | 642939 - 643736 | 29040.9 |
| abc transporter permease | RPYSC3_RS03040 | Not Available | Positive | 643733 - 644563 | 30998.1 |
| polyhydroxyalkanoate depolymerase | RPYSC3_RS03045 | Not Available | Positive | 644702 - 646030 | 49749.7 |
| m48 family metallopeptidase | RPYSC3_RS03050 | Not Available | Positive | 646286 - 647119 | 31879.6 |
| transglycosylase domain-containing protein | RPYSC3_RS03055 | Not Available | Negative | 647184 - 649400 | 78768.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
