Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain-containing protein | RPYSC3_RS02960 | Not Available | Negative | 627909 - 628889 | 38346.5 |
| malonyl-coa decarboxylase | RPYSC3_RS02965 | Not Available | Negative | 629058 - 630479 | 51770.5 |
| pas domain-containing protein | RPYSC3_RS02970 | Not Available | Negative | 630653 - 631258 | 22202.3 |
| mmge/prpd family protein | RPYSC3_RS02975 | Not Available | Negative | 631338 - 632702 | 47913.6 |
| fusc family protein | RPYSC3_RS02980 | Not Available | Positive | 632873 - 633985 | 38817.9 |
| duf2269 family protein | RPYSC3_RS02985 | Not Available | Negative | 633987 - 634448 | 16889.2 |
| hypothetical protein | RPYSC3_RS02990 | Not Available | Positive | 634772 - 635035 | 8582.21 |
| phb depolymerase family esterase | RPYSC3_RS02995 | Not Available | Positive | 635209 - 636393 | 42271.1 |
| duf1236 domain-containing protein | RPYSC3_RS03000 | Not Available | Positive | 636512 - 636931 | 14840.7 |
| arac family transcriptional regulator | RPYSC3_RS03005 | Not Available | Negative | 636995 - 637972 | 35763.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
