Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | RPYSC3_RS02910 | Not Available | Negative | 618375 - 618962 | 22090.1 |
| lysr family transcriptional regulator | RPYSC3_RS02915 | Not Available | Negative | 619593 - 620474 | 31641.1 |
| dicarboxylate/amino acid:cation symporter | RPYSC3_RS02920 | Not Available | Positive | 620580 - 621887 | 45232.6 |
| bifunctional allantoicase/(s)-ureidoglycine aminohydrolase | RPYSC3_RS02925 | Not Available | Positive | 621926 - 622765 | 30315.0 |
| ureidoglycolate lyase | RPYSC3_RS02930 | Not Available | Positive | 622762 - 623271 | 18145.0 |
| class i sam-dependent methyltransferase | RPYSC3_RS02935 | Not Available | Negative | 623322 - 623942 | 22389.4 |
| hnh endonuclease | RPYSC3_RS02940 | Not Available | Negative | 624061 - 624618 | 21378.4 |
| cysteine synthase a | RPYSC3_RS02945 | Not Available | Positive | 624900 - 625898 | 34531.8 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | RPYSC3_RS02950 | Not Available | Negative | 625963 - 626880 | 33638.3 |
| pirin family protein | RPYSC3_RS02955 | Not Available | Negative | 626948 - 627865 | 33537.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
