Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit alpha | RPYSC3_RS00200 | Not Available | Negative | 45790 - 46872 | 40162.9 |
| 50s ribosomal protein l20 | RPYSC3_RS00205 | Not Available | Negative | 47016 - 47375 | 13301.5 |
| 50s ribosomal protein l35 | RPYSC3_RS00210 | Not Available | Negative | 47459 - 47659 | 7547.54 |
| translation initiation factor if-3 | RPYSC3_RS00215 | Not Available | Negative | 47994 - 48533 | 20527.2 |
| alpha/beta hydrolase | RPYSC3_RS00220 | Not Available | Positive | 48854 - 49639 | 28372.9 |
| trna epoxyqueuosine(34) reductase queg | RPYSC3_RS00225 | Not Available | Negative | 49807 - 51015 | 43184.5 |
| glutathione s-transferase family protein | RPYSC3_RS00230 | Not Available | Negative | 50964 - 51656 | 26036.2 |
| undecaprenyl-diphosphate phosphatase | RPYSC3_RS00235 | Not Available | Positive | 51856 - 52662 | 29371.7 |
| complex i ndufa9 subunit family protein | RPYSC3_RS00240 | Not Available | Negative | 52712 - 53677 | 33761.9 |
| Trna-leu | Not Available | Not Available | Positive | 53838 - 53922 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
