Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPYSC3_RS02655 | Not Available | Positive | 564267 - 564413 | 5231.62 |
| site-specific tyrosine recombinase xerd | RPYSC3_RS02660 | Not Available | Positive | 564430 - 565449 | 37054.7 |
| cytochrome b | RPYSC3_RS02665 | Not Available | Negative | 565456 - 566031 | 21405.3 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | RPYSC3_RS02670 | Not Available | Positive | 566306 - 567268 | 34530.2 |
| murein l,d-transpeptidase family protein | RPYSC3_RS02675 | Not Available | Positive | 567640 - 569073 | 51235.7 |
| is630 family transposase | RPYSC3_RS02680 | Not Available | Positive | 569414 - 570362 | 35542.1 |
| preprotein translocase subunit seca | RPYSC3_RS02685 | Not Available | Negative | 570369 - 573209 | 106741.0 |
| peptidylprolyl isomerase | RPYSC3_RS02690 | Not Available | Positive | 573552 - 574472 | 32873.1 |
| dna mismatch repair protein muts | RPYSC3_RS02695 | Not Available | Negative | 574579 - 577299 | 97305.8 |
| 3-oxoadipyl-coa thiolase | RPYSC3_RS02700 | Not Available | Positive | 577476 - 578684 | 41755.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
