Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | RPYSC3_RS02550 | Not Available | Negative | 539104 - 539892 | 27585.3 |
| abc transporter substrate-binding protein | RPYSC3_RS02555 | Not Available | Negative | 540071 - 541228 | 41266.2 |
| thermonuclease family protein | RPYSC3_RS02560 | Not Available | Positive | 541631 - 542446 | 28742.8 |
| m48 family metalloprotease | RPYSC3_RS02565 | Not Available | Positive | 542518 - 543975 | 52815.4 |
| card family transcriptional regulator | RPYSC3_RS02570 | Not Available | Negative | 544055 - 545179 | 39442.9 |
| ferredoxin fdxa | RPYSC3_RS02580 | Not Available | Negative | 545421 - 545759 | 12500.5 |
| rna-binding s4 domain-containing protein | RPYSC3_RS02585 | Not Available | Negative | 545834 - 546103 | 9919.01 |
| helicase-related protein | RPYSC3_RS02590 | Not Available | Negative | 546133 - 549405 | 118422.0 |
| duf3108 domain-containing protein | RPYSC3_RS02595 | Not Available | Negative | 549708 - 550520 | 28814.6 |
| 50s ribosomal protein l28 | RPYSC3_RS02600 | Not Available | Positive | 550883 - 551188 | 10847.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
