Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-7-phosphoheptulonate synthase | RPYSC3_RS00150 | Not Available | Positive | 32180 - 33268 | 38320.7 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | RPYSC3_RS00155 | Not Available | Negative | 33525 - 35114 | 55921.9 |
| heparinase ii/iii family protein | RPYSC3_RS00160 | Not Available | Negative | 35333 - 37048 | 62911.4 |
| rsmb/nop family class i sam-dependent rna methyltransferase | RPYSC3_RS00165 | Not Available | Negative | 37386 - 38738 | 47984.9 |
| duf1674 domain-containing protein | RPYSC3_RS00170 | Not Available | Positive | 38891 - 39109 | 7751.0 |
| thermonuclease family protein | RPYSC3_RS00175 | Not Available | Positive | 39196 - 39768 | 21208.2 |
| yiix/yebb-like n1pc/p60 family cysteine hydrolase | RPYSC3_RS00180 | Not Available | Negative | 39772 - 40659 | 32488.1 |
| flavin monoamine oxidase family protein | RPYSC3_RS00185 | Not Available | Positive | 41008 - 42465 | 50905.9 |
| phenylalanine--trna ligase subunit beta | RPYSC3_RS00190 | Not Available | Negative | 42472 - 44883 | 85287.0 |
| endonuclease domain-containing protein | RPYSC3_RS00195 | Not Available | Negative | 45028 - 45552 | 19721.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
