Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | RPYSC3_RS24810 | Not Available | Negative | 5352692 - 5354068 | 48741.9 |
| response regulator transcription factor | RPYSC3_RS24815 | Not Available | Negative | 5354065 - 5354730 | 24446.2 |
| pepsy domain-containing protein | RPYSC3_RS24820 | Not Available | Negative | 5354730 - 5355068 | 12936.5 |
| hypothetical protein | RPYSC3_RS24825 | Not Available | Negative | 5355161 - 5355466 | 10860.7 |
| s-methyl-5-thioribose-1-phosphate isomerase | RPYSC3_RS24830 | Not Available | Negative | 5355650 - 5356774 | 40035.7 |
| s-methyl-5'-thioadenosine phosphorylase | RPYSC3_RS24835 | Not Available | Negative | 5356885 - 5357760 | 31571.9 |
| iron-containing alcohol dehydrogenase | RPYSC3_RS24840 | Not Available | Positive | 5358040 - 5359182 | 40029.5 |
| amp-binding protein | RPYSC3_RS24845 | Not Available | Positive | 5359347 - 5360897 | 57147.4 |
| ethd domain-containing protein | RPYSC3_RS24850 | Not Available | Negative | 5360949 - 5361323 | 14362.1 |
| merr family transcriptional regulator | RPYSC3_RS24855 | Not Available | Positive | 5361395 - 5361748 | 13055.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
