Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase family protein | RPYSC3_RS24715 | Not Available | Negative | 5328451 - 5329590 | 39909.2 |
| acyl-coa dehydrogenase family protein | RPYSC3_RS24720 | Not Available | Negative | 5329747 - 5330931 | 43453.5 |
| carboxymuconolactone decarboxylase family protein | RPYSC3_RS24725 | Not Available | Positive | 5331097 - 5331642 | 20094.3 |
| mfs transporter | RPYSC3_RS24730 | Not Available | Negative | 5331697 - 5332914 | 41844.1 |
| mfs transporter | RPYSC3_RS24735 | Not Available | Negative | 5333000 - 5334247 | 43327.5 |
| duf938 domain-containing protein | RPYSC3_RS24740 | Not Available | Negative | 5334323 - 5335039 | 25178.1 |
| tonb-dependent receptor plug domain-containing protein | RPYSC3_RS24745 | Not Available | Positive | 5335483 - 5337504 | 73394.4 |
| hypothetical protein | RPYSC3_RS25090 | Not Available | Positive | 5337539 - 5337679 | 5186.17 |
| hypothetical protein | RPYSC3_RS24750 | Not Available | Positive | 5337676 - 5337963 | 10280.9 |
| hypothetical protein | RPYSC3_RS24755 | Not Available | Positive | 5338135 - 5338329 | 6946.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
