Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | RPYSC3_RS24665 | Not Available | Negative | 5316380 - 5317708 | 48184.1 |
| sensor histidine kinase | RPYSC3_RS24670 | Not Available | Positive | 5317915 - 5319996 | 75784.1 |
| duf3369 domain-containing protein | RPYSC3_RS24675 | Not Available | Positive | 5319966 - 5321705 | 63488.6 |
| response regulator | RPYSC3_RS24680 | Not Available | Positive | 5321702 - 5322442 | 26922.7 |
| sigma-70 family rna polymerase sigma factor | RPYSC3_RS24685 | Not Available | Positive | 5322646 - 5323257 | 22861.5 |
| cytochrome ubiquinol oxidase subunit i | RPYSC3_RS24690 | Not Available | Positive | 5323767 - 5325173 | 51435.7 |
| cytochrome d ubiquinol oxidase subunit ii | RPYSC3_RS24695 | Not Available | Positive | 5325193 - 5326197 | 37165.8 |
| duf2474 domain-containing protein | RPYSC3_RS24700 | Not Available | Positive | 5326194 - 5326325 | 4741.13 |
| l,d-transpeptidase | RPYSC3_RS24705 | Not Available | Positive | 5326430 - 5326960 | 19744.7 |
| amino acid abc transporter substrate-binding protein | RPYSC3_RS24710 | Not Available | Positive | 5327001 - 5328035 | 38468.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
