Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | RPYSC3_RS24515 | Not Available | Negative | 5285067 - 5286095 | 39125.3 |
| methylated-dna--[protein]-cysteine s-methyltransferase | RPYSC3_RS24520 | Not Available | Positive | 5286461 - 5287039 | 20526.8 |
| mate family efflux transporter | RPYSC3_RS24525 | Not Available | Negative | 5287036 - 5288472 | 49224.9 |
| hypothetical protein | RPYSC3_RS24530 | Not Available | Negative | 5288583 - 5289632 | 38178.7 |
| pqq-dependent sugar dehydrogenase | RPYSC3_RS24535 | Not Available | Positive | 5289781 - 5291124 | 47524.0 |
| nucleotidyltransferase family protein | RPYSC3_RS24540 | Not Available | Positive | 5291204 - 5291560 | 12935.4 |
| hepn domain-containing protein | RPYSC3_RS24545 | Not Available | Positive | 5291557 - 5291883 | 11616.8 |
| 2'-deoxycytidine 5'-triphosphate deaminase | RPYSC3_RS24550 | Not Available | Negative | 5291976 - 5293082 | 40208.0 |
| o-succinylhomoserine sulfhydrylase | RPYSC3_RS24555 | Not Available | Positive | 5293347 - 5294558 | 43491.9 |
| sgnh/gdsl hydrolase family protein | RPYSC3_RS24560 | Not Available | Negative | 5294704 - 5295681 | 34528.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
