Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPYSC3_RS24105 | Not Available | Negative | 5214125 - 5214325 | 6580.9 |
| nad(p)h-dependent oxidoreductase | RPYSC3_RS24110 | Not Available | Negative | 5214422 - 5215222 | 29386.3 |
| lysr family transcriptional regulator | RPYSC3_RS24115 | Not Available | Positive | 5215317 - 5216231 | 33180.2 |
| 3-hydroxybutyryl-coa dehydrogenase | RPYSC3_RS24120 | Not Available | Negative | 5216246 - 5217127 | 31787.9 |
| electron transfer flavoprotein subunit alpha/fixb family protein | RPYSC3_RS24125 | Not Available | Negative | 5217291 - 5218235 | 32432.9 |
| electron transfer flavoprotein subunit beta/fixa family protein | RPYSC3_RS24130 | Not Available | Negative | 5218235 - 5218984 | 26311.1 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | RPYSC3_RS24135 | Not Available | Negative | 5219090 - 5219662 | 20803.9 |
| twin transmembrane helix small protein | RPYSC3_RS24140 | Not Available | Negative | 5219715 - 5219909 | 7006.2 |
| yihy/virulence factor brkb family protein | RPYSC3_RS24145 | Not Available | Positive | 5220048 - 5220941 | 32082.9 |
| atp-binding protein | RPYSC3_RS24150 | Not Available | Negative | 5220868 - 5222085 | 42466.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
