Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s15 | RPYSC3_RS02295 | Not Available | Negative | 485313 - 485582 | 10186.3 |
| trna pseudouridine(55) synthase trub | RPYSC3_RS02300 | Not Available | Negative | 485585 - 486685 | 39253.9 |
| 30s ribosome-binding factor rbfa | RPYSC3_RS02305 | Not Available | Negative | 486685 - 487098 | 15460.6 |
| translation initiation factor if-2 | RPYSC3_RS02315 | Not Available | Negative | 487273 - 489927 | 95488.3 |
| rna-binding protein | RPYSC3_RS02320 | Not Available | Negative | 489920 - 490699 | 27332.7 |
| transcription termination factor nusa | RPYSC3_RS02325 | Not Available | Negative | 490761 - 492374 | 59448.2 |
| ribosome maturation factor rimp | RPYSC3_RS02330 | Not Available | Negative | 492377 - 493156 | 28081.8 |
| duf2336 domain-containing protein | RPYSC3_RS02335 | Not Available | Positive | 493497 - 494582 | 39723.7 |
| phytanoyl-coa dioxygenase family protein | RPYSC3_RS02340 | Not Available | Positive | 494705 - 495550 | 31420.4 |
| trna (guanine(46)-n(7))-methyltransferase trmb | RPYSC3_RS02345 | Not Available | Negative | 495563 - 496243 | 25854.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
