Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | RPYSC3_RS23845 | Not Available | Positive | 5154217 - 5155245 | 38451.1 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase | RPYSC3_RS23850 | Not Available | Positive | 5155248 - 5155943 | 24368.7 |
| duf1932 domain-containing protein | RPYSC3_RS23855 | Not Available | Positive | 5155943 - 5156872 | 33220.3 |
| amidohydrolase family protein | RPYSC3_RS23860 | Not Available | Positive | 5157123 - 5158037 | 34440.1 |
| protocatechuate 4,5-dioxygenase subunit alpha | RPYSC3_RS23865 | Not Available | Positive | 5158195 - 5158584 | 14661.6 |
| class iii extradiol dioxygenase subunit beta | RPYSC3_RS23870 | Not Available | Positive | 5158584 - 5159438 | 31225.4 |
| gfo/idh/moca family oxidoreductase | RPYSC3_RS23875 | Not Available | Positive | 5159440 - 5160399 | 34908.0 |
| hypothetical protein | RPYSC3_RS23880 | Not Available | Positive | 5160586 - 5160984 | 13869.3 |
| phosphoribosyl-atp diphosphatase | RPYSC3_RS23885 | Not Available | Positive | 5161089 - 5161484 | 14653.7 |
| yqaa family protein | RPYSC3_RS23890 | Not Available | Positive | 5161586 - 5162167 | 21501.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
