Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 5103407 - 5103482 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 5103516 - 5103592 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 5103793 - 5105281 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 5106102 - 5106191 | Not Available |
| alpha,alpha-trehalose-phosphate synthase (udp-forming) | RPYSC3_RS23660 | Not Available | Negative | 5106391 - 5107884 | 54158.3 |
| trehalose-phosphatase | RPYSC3_RS23665 | Not Available | Negative | 5108041 - 5108838 | 28527.4 |
| mfs transporter | RPYSC3_RS23670 | Not Available | Negative | 5108838 - 5110328 | 53307.1 |
| methyl-accepting chemotaxis protein | RPYSC3_RS23675 | Not Available | Negative | 5110507 - 5112549 | 71040.1 |
| arac family transcriptional regulator | RPYSC3_RS23680 | Not Available | Negative | 5112647 - 5113414 | 27924.9 |
| 2-isopropylmalate synthase | RPYSC3_RS23685 | Not Available | Positive | 5113751 - 5115412 | 60906.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
