Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class ii fructose-bisphosphate aldolase | RPYSC3_RS23540 | Not Available | Negative | 5079457 - 5080542 | 39347.3 |
| transketolase | RPYSC3_RS23545 | Not Available | Negative | 5080602 - 5082614 | 70798.3 |
| phosphoribulokinase | RPYSC3_RS23550 | Not Available | Negative | 5082646 - 5083521 | 33210.7 |
| class 1 fructose-bisphosphatase | RPYSC3_RS23555 | Not Available | Negative | 5083559 - 5084590 | 36659.7 |
| alpha/beta hydrolase | RPYSC3_RS23560 | Not Available | Positive | 5085004 - 5085810 | 28078.7 |
| iclr family transcriptional regulator | RPYSC3_RS23565 | Not Available | Negative | 5085900 - 5086655 | 27780.9 |
| extracellular solute-binding protein | RPYSC3_RS23570 | Not Available | Negative | 5086737 - 5087825 | 39961.9 |
| abc transporter permease subunit | RPYSC3_RS23575 | Not Available | Negative | 5087859 - 5089652 | 63415.0 |
| abc transporter atp-binding protein | RPYSC3_RS23580 | Not Available | Negative | 5089649 - 5090794 | 41418.0 |
| coa transferase subunit a | RPYSC3_RS23585 | Not Available | Positive | 5091049 - 5091855 | 28598.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
