Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron response transcriptional regulator irra | RPYSC3_RS02245 | Not Available | Negative | 470681 - 471172 | 18450.9 |
| bifunctional 3-hydroxydecanoyl-acp dehydratase/trans-2-decenoyl-acp isomerase | RPYSC3_RS02250 | Not Available | Positive | 471430 - 471957 | 19412.7 |
| beta-ketoacyl-acp synthase i | RPYSC3_RS02255 | Not Available | Positive | 472019 - 473245 | 42982.2 |
| enoyl-acp reductase fabi | RPYSC3_RS02260 | Not Available | Positive | 473441 - 474250 | 28663.6 |
| duf3060 domain-containing protein | RPYSC3_RS02265 | Not Available | Negative | 474619 - 475137 | 17870.3 |
| catalase/peroxidase hpi | RPYSC3_RS02270 | Not Available | Negative | 475370 - 477580 | 81284.6 |
| lysr substrate-binding domain-containing protein | RPYSC3_RS02275 | Not Available | Positive | 477852 - 478790 | 33984.3 |
| pas domain-containing methyl-accepting chemotaxis protein | RPYSC3_RS02280 | Not Available | Negative | 478802 - 480484 | 60326.2 |
| pas domain-containing methyl-accepting chemotaxis protein | RPYSC3_RS02285 | Not Available | Negative | 480854 - 482521 | 61026.8 |
| polyribonucleotide nucleotidyltransferase | RPYSC3_RS02290 | Not Available | Negative | 482804 - 484972 | 78289.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
