Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative nitrogen fixation protein nift | RPYSC3_RS23445 | Not Available | Negative | 5060117 - 5060317 | 7259.99 |
| nitrogen fixation protein nifz | RPYSC3_RS23450 | Not Available | Negative | 5060355 - 5060588 | 8778.33 |
| nitrogen fixation protein nifz | RPYSC3_RS23455 | Not Available | Negative | 5060588 - 5060887 | 11085.2 |
| 4fe4s-binding leucine-rich repeat protein | RPYSC3_RS23460 | Not Available | Negative | 5060884 - 5061669 | 29735.4 |
| hypothetical protein | RPYSC3_RS23465 | Not Available | Negative | 5061659 - 5062198 | 19851.7 |
| hesb/isca family protein | RPYSC3_RS23470 | Not Available | Negative | 5062202 - 5062558 | 12507.9 |
| 4fe-4s binding protein | RPYSC3_RS23475 | Not Available | Negative | 5062569 - 5062790 | 7706.13 |
| nitrogenase cofactor biosynthesis protein nifb | RPYSC3_RS23480 | Not Available | Negative | 5062817 - 5064373 | 56270.5 |
| 4fe-4s binding protein | RPYSC3_RS23485 | Not Available | Negative | 5064532 - 5064726 | 6860.25 |
| nif-specific transcriptional activator nifa | RPYSC3_RS23490 | Not Available | Negative | 5065002 - 5066756 | 64818.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
