Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cce_0567 family metalloprotein | RPYSC3_RS23395 | Not Available | Negative | 5050215 - 5050421 | 7562.13 |
| nifx-associated nitrogen fixation protein | RPYSC3_RS23400 | Not Available | Negative | 5050439 - 5050903 | 17471.4 |
| nitrogen fixation protein nifx | RPYSC3_RS23405 | Not Available | Negative | 5050905 - 5051303 | 14638.6 |
| nitrogenase iron-molybdenum cofactor biosynthesis protein nifn | RPYSC3_RS23410 | Not Available | Negative | 5051359 - 5052732 | 48357.1 |
| nitrogenase iron-molybdenum cofactor biosynthesis protein nife | RPYSC3_RS23415 | Not Available | Negative | 5052743 - 5054206 | 53630.6 |
| nitrogenase molybdenum-iron protein subunit beta | RPYSC3_RS23420 | Not Available | Negative | 5054245 - 5055804 | 57536.1 |
| nitrogenase molybdenum-iron protein alpha chain | RPYSC3_RS23425 | Not Available | Negative | 5055882 - 5057345 | 54508.1 |
| nitrogenase iron protein | RPYSC3_RS23430 | Not Available | Negative | 5057417 - 5058310 | 31941.5 |
| sir2 family protein | RPYSC3_RS23435 | Not Available | Negative | 5058919 - 5059821 | 33425.0 |
| hypothetical protein | RPYSC3_RS23440 | Not Available | Negative | 5059836 - 5060114 | 9857.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
