Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 5 protein | RPYSC3_RS23245 | Not Available | Negative | 5018978 - 5020114 | 41645.7 |
| gumc family protein | RPYSC3_RS23250 | Not Available | Negative | 5020129 - 5022267 | 76726.9 |
| glycosyltransferase family 4 protein | RPYSC3_RS23255 | Not Available | Positive | 5022647 - 5023771 | 40831.5 |
| hypothetical protein | RPYSC3_RS23260 | Not Available | Positive | 5023797 - 5025326 | 56060.8 |
| vanz family protein | RPYSC3_RS23265 | Not Available | Negative | 5025345 - 5025704 | 12652.0 |
| lipopolysaccharide biosynthesis protein | RPYSC3_RS23270 | Not Available | Positive | 5025963 - 5027315 | 48362.0 |
| homoserine o-succinyltransferase meta | RPYSC3_RS23275 | Not Available | Negative | 5027384 - 5028385 | 36997.2 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein | RPYSC3_RS23280 | Not Available | Negative | 5028399 - 5029700 | 47106.8 |
| long-chain-acyl-coa synthetase | RPYSC3_RS23285 | Not Available | Positive | 5029963 - 5031780 | 65981.9 |
| branched-chain amino acid aminotransferase | RPYSC3_RS23290 | Not Available | Positive | 5031792 - 5032661 | 32089.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
