Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPYSC3_RS23195 | Not Available | Negative | 5007854 - 5008138 | 9848.45 |
| abc transporter atp-binding protein | RPYSC3_RS23200 | Not Available | Positive | 5008296 - 5009861 | 55383.8 |
| abc transporter permease | RPYSC3_RS23205 | Not Available | Positive | 5009845 - 5010936 | 37997.7 |
| abc transporter permease | RPYSC3_RS23210 | Not Available | Positive | 5010923 - 5011840 | 30498.2 |
| bmp family abc transporter substrate-binding protein | RPYSC3_RS23215 | Not Available | Positive | 5011919 - 5013016 | 39745.6 |
| s1c family serine protease | RPYSC3_RS23220 | Not Available | Negative | 5013206 - 5014171 | 34074.9 |
| bug family tripartite tricarboxylate transporter substrate binding protein | RPYSC3_RS23225 | Not Available | Negative | 5014291 - 5015286 | 34259.1 |
| o-antigen ligase family protein | RPYSC3_RS23230 | Not Available | Positive | 5015545 - 5016804 | 45437.4 |
| udp-glucose 4-epimerase gale | RPYSC3_RS23235 | Not Available | Positive | 5016835 - 5017818 | 35445.1 |
| wecb/taga/cpsf family glycosyltransferase | RPYSC3_RS23240 | Not Available | Positive | 5018046 - 5018963 | 34878.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
