Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter small permease | RPYSC3_RS23095 | Not Available | Negative | 4986847 - 4987398 | 19884.9 |
| trap transporter substrate-binding protein dctp | RPYSC3_RS23100 | Not Available | Negative | 4987432 - 4988457 | 36805.3 |
| caib/baif coa transferase family protein | RPYSC3_RS23105 | Not Available | Positive | 4988659 - 4989855 | 43470.3 |
| maoc family dehydratase | RPYSC3_RS23110 | Not Available | Positive | 4989876 - 4990352 | 17947.6 |
| hpch/hpai aldolase/citrate lyase family protein | RPYSC3_RS23115 | Not Available | Positive | 4990352 - 4991200 | 29934.9 |
| iclr family transcriptional regulator | RPYSC3_RS23120 | Not Available | Positive | 4991241 - 4991972 | 26966.4 |
| gmp reductase | RPYSC3_RS23125 | Not Available | Negative | 4992114 - 4993157 | 37276.8 |
| ketopantoate reductase family protein | RPYSC3_RS23130 | Not Available | Positive | 4993245 - 4994150 | 30800.5 |
| thermonuclease family protein | RPYSC3_RS23135 | Not Available | Negative | 4994152 - 4994901 | 27127.7 |
| paai family thioesterase | RPYSC3_RS23140 | Not Available | Positive | 4995029 - 4995943 | 32655.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
