Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPYSC3_RS23045 | Not Available | Positive | 4977939 - 4978226 | 9168.6 |
| fad-dependent oxidoreductase | RPYSC3_RS23050 | Not Available | Negative | 4978294 - 4979985 | 59218.6 |
| hypothetical protein | RPYSC3_RS23055 | Not Available | Negative | 4980018 - 4980227 | 7413.62 |
| nuclear transport factor 2 family protein | RPYSC3_RS23060 | Not Available | Positive | 4980302 - 4980748 | 16301.7 |
| Trna-thr | Not Available | Not Available | Positive | 4980933 - 4981007 | Not Available |
| hypothetical protein | RPYSC3_RS23070 | Not Available | Positive | 4981103 - 4981600 | 18494.8 |
| duf2130 domain-containing protein | RPYSC3_RS23075 | Not Available | Positive | 4981727 - 4983016 | 47633.8 |
| acetyl-coa hydrolase/transferase family protein | RPYSC3_RS23080 | Not Available | Negative | 4983053 - 4984297 | 43376.1 |
| acyl-coa dehydrogenase family protein | RPYSC3_RS23085 | Not Available | Negative | 4984323 - 4985489 | 42676.4 |
| trap transporter large permease | RPYSC3_RS23090 | Not Available | Negative | 4985546 - 4986835 | 44759.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
