Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1850 domain-containing protein | RPYSC3_RS22900 | Not Available | Negative | 4950804 - 4951214 | 14242.1 |
| trap transporter permease | RPYSC3_RS22905 | Not Available | Negative | 4951175 - 4953295 | 75458.0 |
| taxi family trap transporter solute-binding subunit | RPYSC3_RS22910 | Not Available | Negative | 4953441 - 4954388 | 32932.9 |
| mfs transporter | RPYSC3_RS22915 | Not Available | Positive | 4954544 - 4955809 | 42568.2 |
| response regulator | RPYSC3_RS22920 | Not Available | Negative | 4955828 - 4956184 | 12804.7 |
| hwe histidine kinase domain-containing protein | RPYSC3_RS22925 | Not Available | Negative | 4956194 - 4957198 | 36730.3 |
| alkaline phosphatase d family protein | RPYSC3_RS22930 | Not Available | Positive | 4957378 - 4958982 | 59009.7 |
| bug family tripartite tricarboxylate transporter substrate binding protein | RPYSC3_RS22935 | Not Available | Positive | 4959118 - 4960125 | 35849.3 |
| eal domain-containing protein | RPYSC3_RS22940 | Not Available | Positive | 4960367 - 4961581 | 44176.4 |
| hypothetical protein | RPYSC3_RS22945 | Not Available | Negative | 4961598 - 4962056 | 16495.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
